DFT-Based fuzzy topological indices integrated with machine learning for accurate prediction of topical drug properties
- Department of Applied Mathematics, Semnan University, Semnan, Iran
Received: 2025-09-30
Revised: 2025-12-10
Accepted: 2025-12-25
Published in Issue 2025-12-30
Copyright (c) 2025 Negar Kheirkhahan, Masoud Ghods (Author)

This work is licensed under a Creative Commons Attribution 4.0 International License.
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Abstract
In this study, we developed a novel framework to predict the physicochemical properties of topical drugs by integrating fuzzy topological indices with machine learning (ML) models. The chemical structures of the selected drugs were optimized using Gaussian software, and both bond lengths (edges) and vertex properties, corresponding to the atomic masses of each molecule, were fuzzified through Density Functional Theory (DFT). Fuzzy topological indices (FTIs) were then calculated to capture the relationships between molecular geometry, atomic composition, and topological features. Two machine learning algorithms, Linear Regression (LR) and optimized Support Vector Regression (SVR-Tuned), were employed for property prediction. The models were trained on the main dataset and validated on additional test drugs excluded from training, enabling a rigorous assessment of generalization, predictive accuracy, and the absence of overfitting. The results showed that the proposed fuzzy QSPR framework, combined with optimized, achieves high predictive performance, robustness, and strong generalization. This methodology provides an efficient computational tool for estimating molecular properties and can support the rational design of next-generation topical pharmaceutical agents.
Keywords
- Machine Learning (ML),
- Fuzzy QSPR,
- Topical drugs,
- Fuzzy topological indices (FTIs)
References
- R. Saatchi. Fuzzy logic concepts, developments and implementation. Information, 15(10): 656, 2024.
- M. N. M. Kumari and R. Chandrasekhar. Isomorphism on interval-valued fuzzy graphs. IOSR Journal of Mathematics, 12(1): 24–31, 2016.
- A. Rosenfeld. Fuzzy graphs. In L. A. Zadeh, K. S. Fu, and M. Shimura, editors, Fuzzy Sets and Their Applications, pages 77–95. Academic Press, New York, 1975.
- P. Bhattacharya. Some remarks on fuzzy graphs. Pattern Recognition Letters, 6(5): 297–302, 1987.
- J. N. Mordeson and C.-S. Peng. Operations on fuzzy graphs. Information Sciences, 79(3–4): 159–170, 1994.
- M. S. Sunitha and A. Vijayakumar. Complement of a fuzzy graph. Indian Journal of Pure and Applied Mathematics, 33(9): 1451–1464, 2002.
- K. Kumari. Fuzzy sets and fuzzy logic: A review of concepts, trends, and applications. International Journal of Physics and Mathematics, 7(2): 155–161, 2025.
- J. Hongmei and W. Lianhua. Interval-valued fuzzy subsemigroups and subgroups associated by interval-valued fuzzy graphs. In Proceedings of the 2009 WRI Global Congress on Intelligent Systems, pages 484–487. IEEE, 2009.
- Y. Rao, S. Lei, A. A. Talebi, and M. Mojahedfar. A novel concept of level graph in interval-valued fuzzy graphs with application. Symmetry, 15(12): 2106, 2023.
- M. Akram and B. Davvaz. Strong intuitionistic fuzzy graphs. Filomat, 26(1): 177–196, 2012.
- M. Akram. Bipolar fuzzy graphs. Information Sciences, 181(24): 5548–5564, 2011.
- M. Akram and M. G. Karunambigai. Metric in bipolar fuzzy graphs. World Applied Sciences Journal, 14(12): 1920–1927, 2011.
- A. Nagoorgani and J. Malarvizhi. Isomorphism properties on strong fuzzy graphs. International Journal of Algorithms, Computation and Mathematics, 2(1): 39–47, 2009.
- A. Nagoor Gani and J. Malarvizhi. Isomorphism on fuzzy graphs. International Journal of Computer Mathematics Sciences, 2(4): 200–206, 2008.
- S. Hayat and M. Imran. Degree-based indices for naphthalene nanotubes. Computational and Theoretical Chemistry, 1072: 106–115, 2015.
- S. Kalatgian, et al. Fuzzy graph indices in hydrocarbons. Computational and Theoretical Chemistry, 1175: 113–122, 2020.
- Z. S. Mufti, E. Fatima, R. Anjum, F. Tchier, and M. Saleem, et al. Computing first and second fuzzy Zagreb indices of linear and multiacyclic hydrocarbons. Journal of Function Spaces, 2022: Article ID 6281592, 8 pages, 2022.
- M. Hasani and M. Ghods. Investigating fuzzy topological indices of linear and cyclic anthracene hydrocarbon. Fuzzy Optimization and Modeling Journal (FOMJ), 5(4): 1–19, 2024.
- S. R. Islam and M. Pal. Second Zagreb index for fuzzy graphs and its application in mathematical chemistry. Iranian Journal of Fuzzy Systems, 20(1): 119–136, 2023.
- M. Roozbeh, S. Babaie-Kafaki, and M. Manavi. A heuristic algorithm to combat outliers and multicollinearity in regression model analysis. Iranian Journal of Numerical Analysis and Optimization, 12(1): 173–186, 2022.
- M. Roozbeh and M. Maanavi. Mammalian eye gene expression using support vector regression to evaluate a strategy for detecting human eye disease. Iranian Journal of Health Sciences, 10(2): 47–58, 2022.
- X. Shi, S. Kosari, M. Ghods, and N. Kheirkhahan. Innovative approaches in QSPR modelling using topological indices for the development of cancer treatments. PLoS One, 20(2): e0317507, 2025.
- A. Verma, S. Mondal, N. De, and A. Pal. Topological properties of bismuth tri-iodide using neighborhood M-polynomial. International Journal of Mathematics Trends and Technology, 65(10): 83–94, 2019.
- S. Kalathian, S. Ramalingam, S. Raman, and N. Srinivasan. Some topological indices in fuzzy graphs. Journal of Intelligent & Fuzzy Systems, 39(5): 6033–6046, 2020.
10.57647/j.fomj.2025.0604.24
